t-viSNE: Interactive Assessment and Interpretation of t-SNE Projections
https://doi.org/10.1109/TVCG.2020.2986996
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369 lines
18 KiB
369 lines
18 KiB
<html>
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<head>
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<link rel="icon" href="data:;base64,iVBORw0KGgo=">
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<script src='./modules/three.js-r101/three.js'></script>
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<script src='./modules/lodash/lodash.js'></script>
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<!-- Importing D3 minified versions v3 and v5. -->
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<script src='./modules/d3v3/d3.min.js'></script>
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<script src='./modules/d3/d3.min.js'></script>
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<!-- Importing additional modules such as PCP, annotator, tip, legend, lasso, papaParse, and Jquery. -->
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<script src='./modules/d3-annotations/d3-annotator.js'></script>
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<script src="./modules/d3-tip/tip.js"></script>
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<script src="./modules/d3-lasso/lasso.js"></script>
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<script src="./modules/plotly/plotly_min.js"></script>
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<script src="./modules/pcp/d3v3.parcoords.js"></script>
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<script src="./modules/papa/papaparse.min.js"></script>
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<script src="./modules/jquery/jquery.min.js"></script>
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<!-- Basic scripts that we execute. -->
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<script src="./js/tsne.js"></script>
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<script src="./js/data_form_handler.js"></script>
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<script src="./modules/pca/pca.js"></script>
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<!-- CSS - Styling -->
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<link rel="stylesheet" href="./css/style.css"/>
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<link rel="stylesheet" href="./css/bootstrap.min.css"/>
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<link rel="stylesheet" href="./css/d3.parcoords.css">
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<link rel="stylesheet" href="./css/reset.css">
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<!-- Bootstrap -->
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<script src="./modules/bootstrap/bootstrap.min.js"></script>
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</head>
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<body>
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<div class="container-fluid">
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<div class="row">
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<div class="col-md-3">
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<div class="panel panel-default">
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<div class="panel-heading">
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<h2 class="panel-title" style="display:inline-block">t-SNE Overview</h2><div id="datasetDetails"style="display:inline-block; float:right"></div>
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</div>
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<div class="row">
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<div class="panel-body">
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<div class="col-md-6">
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<div id="overviewRect"></div>
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</div>
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<div class="col-md-6">
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<div style="display:block" id="CategoryName"></div>
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<div class="legend" id = "legend2"></div>
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</div>
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</div>
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</div>
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<div id="control-panel" class="PoinRadius">
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<div class="param">
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<label for="param-lim" >Points radius scaling factor</label>
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<input id="param-lim" type="range" min="1" max="4" value="3", step="0.5" onchange="setReInitialize(true);">
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<output for="param-lim" id="param-lim-value" >3</output>
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</div>
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</div>
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</div>
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</div>
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<div class="col-md-6">
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<svg id="SvgAnnotator"></svg>
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<svg id="modtSNEcanvas_svg"></svg>
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<svg id="modtSNEcanvas_svg_Schema"></svg>
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<div id="modtSNEDiv">
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<canvas id = "modtSNEcanvas" ></canvas>
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</div>
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</div>
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<div class="col-md-1" style="width: 3.499999995%">
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<svg id="legend1"></svg>
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</div>
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<div class="col-md-2" style="width: 21.499999995%">
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<div class="panel panel-default">
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<div class="panel-heading">
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<h2 class="panel-title">Select Different Modes</h2>
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</div>
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<div class="panel-body">
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<div id="resetAllFilters" style="margin-bottom: 40px">
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<button class="btn btn-info btn-block active" onclick="setLayerProj();">t-SNE points exploration</button>
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<button class="btn btn-info btn-block" onclick="setLayerComp();">Points selection and data features comparison</button>
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<button class="btn btn-info btn-block" onclick="setLayerSche();">Schema investigation</button>
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</div>
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<button class="btn btn-info btn-block" onclick="setReset();">Reset all filters</button>
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<label style="margin-top: 15px">
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<input id="controls" type="checkbox">
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Hide annotations' controllers
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</label>
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<label style="margin-top: 15px">
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<input id="downloadDists" checked type="checkbox">
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Distances cache (Save Exec.)
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</label>
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<div class="row">
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<div class="col-md-3">
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<div class="panel panel-default">
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<div class="panel-heading">
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<h2 class="panel-title">Shepard Heatmap</h2>
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</div>
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<div class="panel-body">
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<div class="row">
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<div class="col-md-6">
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<svg id="sheparheat"></svg>
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</div>
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<div class="col-md-2">
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<svg id="legend3"></svg>
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<div id="hider2"></div>
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<div id="PlotCost"></div>
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</div>
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</div>
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</div>
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</div>
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</div>
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<div class="col-md-3 col-md-offset-6">
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<div class="panel panel-default right-side-cor">
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<div class="panel-heading">
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<h2 class="panel-title" style="display:inline-block">Correl. Schema Investigation</h2><div class="param" style="display:inline-block; float:right"><label for="param-corlim" style="display:inline-block; float: right">Mininum Correlation: #<output for="param-corlim" id="param-corlim-value" style="display:inline-block; float:right">0.5</output></label>
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<input id="param-corlim" type="range" min="0" max="1" value="0.5", step="0.1" style="display:inline-block; float:right" onchange="CalculateCorrel(true);">
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</div>
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</div>
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<div class="panel-body">
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<svg id="correlation"></svg>
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</div>
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</div>
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</div>
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<div class="row">
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<div class="col-md-3">
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<div class="panel panel-default" id="left-side-param">
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<div class="panel-heading">
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<h2 class="panel-title" style="display:inline-block">t-SNE Parameters</h2><div id="cost" style="display:inline-block; float:right"></div>
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</div>
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<div class="panel-body">
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<div id="control-panel" data-sr="enter left over 8s">
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<div class="param">
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<label id="data" for="param-dataset">Data sets</label>
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<select id="param-dataset" name="param-dataset" onChange="changeDataset(this.value);">
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<option value="diabetes.csv" selected>Pima Indian Diabetes</option>
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<option value="breast-cancer-wisconsin.csv">Breast Cancer Wisconsin</option>
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<option value="iris.csv">Iris</option>
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<option value="winequality-red.csv">Red Wine - Quality</option>
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<option value="bank-additional_s.csv">Bank Marketing</option>
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<option value="mnist.csv" >Mnist</option>
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<option value="Frogs_MFCCs_s.csv" >Frogs</option>
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<option value="empty">Upload New File</option>
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</select>
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<button type="button" class="button" id="FactRes" onclick="FactoryReset()">Factory reset</button>
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</div>
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<div class="param">
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<label for="param-perplexity">Perplexity</label>
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<input id="param-perplexity" type="range" min="5" max="100" value="30", step="1">
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<output for="param-perplexity" id="param-perplexity-value">30</output>
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</div>
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<div class="param">
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<label for="param-learningrate">Learning rate</label>
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<input id="param-learningrate" type="range" min="1" max="150" value="10", step="1">
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<output for="param-learningrate" id="param-learningrate-value">10</output>
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</div>
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<div class="param">
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<label for="param-maxiter">Max iterations</label>
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<input id="param-maxiter" type="range" min="10" max="1000" value="500", step="10">
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<output for="param-maxiter" id="param-maxiter-value">500</output>
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</div>
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<div class="param">
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<label for="param-distance">Distance metric</label>
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<select id="param-distance" name="param-distance">
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<option value="euclideanDist" selected>Euclidean distance</option>
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<option value="jaccardDist">Jaccard dissimilarity</option>
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</select>
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<input id="file-input" type="file" name="name" style="display: none;" />
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<button type="button" class="button" onclick='loadAnalysis();'>Load Execut.</button>
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</div>
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<div class="param">
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<label for="param-transform">Data transform</label>
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<select id="param-transform" name="param-transform">
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<option value="noTrans" selected>No transform</option>
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<option value="logTrans">Log10</option>
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<option value="asinhTrans">Asinh</option>
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<option value="binTrans">Binarize</option>
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</select>
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<button type="button" class="button" onclick="SaveAnalysis()">Save Execut.</button>
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</div>
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<p><div id="run-button"><button id="ExecuteBut" class="btn btn-primary btn-block" onclick="getData();" value="Execute new t-SNE analysis">Execute new t-SNE analysis</button></div></p>
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</div>
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</div>
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</div>
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</div>
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<div class="col-md-3 col-md-offset-6">
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<div class="panel panel-default right-side-star">
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<div class="panel-heading">
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<h2 class="panel-title">Parallel Coordinates Plot with Local PCA Calculation</h2>
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</div>
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<div class="panel-body">
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<div id="PCP" class="parcoords"></div>
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</div>
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</div>
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</div>
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<div class="row">
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<div class="col-md-3">
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<div class="panel panel-default" id="left-side-visual">
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<div class="panel-heading">
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<h2 class="panel-title">Visual Mapping Parameters</h2>
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</div>
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<div class="row">
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<div class="panel-body">
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<div class="col-md-12">
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<div id="ThumbNailsList">
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<div class="param" >
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<label for="male">Density (1/sigma)</label>
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<select id="param-neighborHood" name ="param-neighborHood" onchange="setReInitialize(true);" style="display:inline-block">
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<option selected="selected" value="color">Color-encoding</option>
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<option value="size">Size-encoding</option>
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</select>
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<button class="button" onclick="deleteAnnotations();" style="display:inline-block; float:right">Delete Annotations</button>
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</div>
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<output for="param-neighborHood" id="param-neighborHood-value"></output>
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<label for="male">Final Cost (Kullback-Leibler Divergence)</label>
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<label id="selectionLabel" style="margin-top:4px">Size-encoding</label>
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<div id="param-correlation">
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<div class="param">
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<label for="param-corr">Correlation threshold</label>
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<input id="param-corr" type="range" min="0" max="750" value="150", step="25" onchange="CalculateCorrel(true);">
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<output for="param-corr" id="param-corr-value">150</output>
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</div>
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Annotation: <textarea type="text" id="comment" name="textforAnnotator" style="margin-top:4px" placeholder="Please, provide your comment."></textarea>
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</div>
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<div id="commBtn">
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<div class="param" style="margin-top:4px">
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<div id="toggleAnnotator"><button class="btn btn-default btn-block" onclick="setAnnotator();">Addition of a new comment</button></div>
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</div>
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<div class="param" style="margin-top:4px">
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<div id="continue"><button class="btn btn-default btn-block active" onclick="setContinue();">Continuation of the analysis</button></div>
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</div>
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</div>
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</div>
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</div>
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</div>
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</div>
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</div>
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</div>
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<div class = col-md-6>
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<div class="panel panel-default med-bottom">
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<div class="panel-heading">
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<h2 class="panel-title" style="display:inline-block">Neighborhood Preservation</h2><div id="knnBarChartDetails"style="display:inline-block; float:right"></div>
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</div>
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<div class="panel-body">
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<div id="hider"></div>
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<div id="knnBarChart"></div>
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</div>
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</div>
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</div>
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<div class="col-md-3" id="extra-information" style="width: 24.6vw">
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<div class="panel panel-default right-side-hist">
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<div class="panel-heading">
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<h2 class="panel-title" style="display:inline-block;">1/sigma and KLD Distributions</h2><div class="param" style="display:inline-block; float:right"><label for="param-costlim" style="display:inline-block; float: right">Minimum Cost Boundary: #<output for="param-costlim" id="param-costlim-value" style="display:inline-block; float:right">1</output></label>
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<input id="param-costlim" type="range" min="0" max="1" value="1", step="1" style="display:inline-block; float:right" onchange="setReInitialize(false);">
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</div>
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</div>
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<div class="panel-body">
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<div id="costHist"></div>
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</div>
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</div>
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</div>
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</div>
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</div>
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<script>
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$("#cost").html('(Unknown iteration and cost values.)');
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$("#datasetDetails").html('(Unknown number of features and instances.)');
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$("#CategoryName").html('No Classification');
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$("#knnBarChartDetails").html('(Number of Selected Points: 0/0)');
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/* This script is used in order to give functionalities to the different buttons provide through the front-end. */
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$('#param-lim').bind('input', function () { $('#param-lim-value').text($('#param-lim').val()); });
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$('#param-corr').bind('input', function () { $('#param-corr-value').text($('#param-corr').val()); });
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$('#param-corlim').bind('input', function () { $('#param-corlim-value').text($('#param-corlim').val()); });
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$('#param-costlim').bind('input', function () { $('#param-costlim-value').text($('#param-costlim').val()); });
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$('#param-perplexity').bind('input', function () { $('#param-perplexity-value').text($('#param-perplexity').val()); });
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$('#param-earlyexag').bind('input', function () { $('#param-earlyexag-value').text($('#param-earlyexag').val()); });
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$('#param-learningrate').bind('input', function () { $('#param-learningrate-value').text($('#param-learningrate').val()); });
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$('#param-maxiter').bind('input', function () { $('#param-maxiter-value').text($('#param-maxiter').val()); });
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// Get the container element
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var btnContainer = document.getElementById("commBtn"); //Add a new comment button
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// Get all buttons with class="btn" inside the container
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var btns = btnContainer.getElementsByClassName("btn");
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for (var i = 0; i < btns.length; i++) {
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btns[i].addEventListener("click", function() {
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let current = document.getElementById("commBtn").getElementsByClassName("active");
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current[0].className = current[0].className.replace("btn btn-default btn-block active", "btn btn-default btn-block");
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this.className += " active";
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});
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}
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// Get the container element
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var btnContainer2 = document.getElementById("resetAllFilters"); //resetAllFilters button
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// Get all buttons with class="btn" inside the container
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var btns2 = btnContainer2.getElementsByClassName("btn");
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for (var i = 0; i < btns2.length; i++) {
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btns2[i].addEventListener("click", function() {
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let current = document.getElementsByClassName("active");
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current[0].className = current[0].className.replace("btn btn-info btn-block active", "btn btn-info btn-block");
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this.className += " active";
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});
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}
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</script>
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<script>
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/* On resize refresh the shepardHeatmap */
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window.onresize = function(event) {
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if ( document.getElementById('cost').hasChildNodes() ) {
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// Clear legend for the shepardHeatmap
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//var svgLegend = d3.select("#legend3");
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//svgLegend.selectAll("*").remove();
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// Clear the SheapHeardmap before refreshing
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//var svg = d3.select("#sheparheat");
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//svg.selectAll("*").remove();
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// Call the ShepardHeatmap again to be redrawn
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//ShepardHeatMap();
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MainVisual();
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}
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}
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/* When the user clicks on the button,
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toggle between hiding and showing the dropdown content */
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function myFunction() {
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document.getElementById("myDropdown").classList.toggle("show");
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}
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// Close the dropdown menu if the user clicks outside of it
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window.onclick = function(event) {
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if (!event.target.matches('.dropbtn')) {
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var dropdowns = document.getElementsByClassName("dropdown-content");
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var i;
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for (i = 0; i < dropdowns.length; i++) {
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var openDropdown = dropdowns[i];
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if (openDropdown.classList.contains('show')) {
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openDropdown.classList.remove('show');
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}
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}
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}
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}
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</script>
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<!-- Load the core visualization script. -->
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<script src="./js/tsne_vis.js"></script>
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</body>
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</html>
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