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added comments, fixed schema investigation

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master
Angelos Chatzimparmpas 5 years ago
parent 50cc70783d
commit bb30bdd3a3
1 changed files with 40 additions and 58 deletions
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  1. 98
      js/tsne_vis.js

98
js/tsne_vis.js
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@ -258,6 +258,7 @@ function setReset(){ // Reset only the filters which were applied into the data
for (var i=0; i < InitialStatePoints.length; i++){
InitialStatePoints[i].selected = true;
InitialStatePoints[i].starplot = false;
InitialStatePoints[i].schemaInv = false;
}
redraw(InitialStatePoints);
@ -330,12 +331,7 @@ function setLayerComp(){ // The main Layer becomes the comparison (starplot)
lassoEnable();
}
// Reset the points into their initial state
for (var i=0; i < InitialStatePoints.length; i++){
InitialStatePoints[i].selected = true;
InitialStatePoints[i].starplot = false;
}
redraw(InitialStatePoints);
redraw(points);
}
@ -758,7 +754,7 @@ function updateEmbedding(AnalaysisResults) {
for(var i = 0; i < final_dataset.length; i++) {
x_position[i] = x(Y[i][0]); // x points position
y_position[i] = y(Y[i][1]); // y points position
points[i] = {id: i, x: x_position[i], y: y_position[i], beta: final_dataset[i].beta, cost: final_dataset[i].cost, selected: true, DimON: null, starplot: false}; // Create the points and points2D (2 dimensions)
points[i] = {id: i, x: x_position[i], y: y_position[i], beta: final_dataset[i].beta, cost: final_dataset[i].cost, selected: true, schemaInv: false, DimON: null, starplot: false}; // Create the points and points2D (2 dimensions)
points2d[i] = {id: i, x: x_position[i], y: y_position[i], selected: true}; // and add everything that we know about the points (e.g., selected = true, starplot = false in the beginning and so on)
points[i] = extend(points[i], ArrayContainsDataFeaturesCleared[i]);
points[i] = extend(points[i], dataFeatures[i]);
@ -1220,18 +1216,15 @@ function handleLassoEnd(lassoPolygon) { // This is for the lasso interaction
x = points[i].x;
y = points[i].y;
if (d3.polygonContains(lassoPolygon, [x, y])){ // Check if the points are inside the area of the lasso
points[i].selected = true;
points2d[i].selected = true;
points[i].selected = true;
} else{
countLassoFalse = countLassoFalse + 1; // Count the points which are not inside the lasso interaction.
points[i].selected = false;
points2d[i].selected = false;
}
}
if (countLassoFalse == points.length){
for (var i = 0 ; i < points.length ; i ++) {
points[i].selected = true;
points2d[i].selected = true;
}
}
if (points.length - countLassoFalse <= 10 && points.length - countLassoFalse != 0){ // Check the points for the starplot
@ -1250,17 +1243,7 @@ function handleLassoEnd(lassoPolygon) { // This is for the lasso interaction
}
function handleLassoStart(lassoPolygon) {
// Reset selected points when starting a new polygon
for (var i = 0 ; i < points.length ; i ++) {
points[i].selected = true;
points[i].starplot = false;
points2d[i].selected = true;
}
redraw(points);
function handleLassoStart(lassoPolygon) { // Empty we do not need to reset anything.
}
// Initialize the horizontal (correlations) barchart's variables
@ -1413,6 +1396,7 @@ function CalculateCorrel(){ // Calculate the correlation is a function which has
}
}
var temparray = [];
var count = new Array(paths.nodes().length).fill(0);
@ -1463,6 +1447,7 @@ function CalculateCorrel(){ // Calculate the correlation is a function which has
for (var j = 0; j < ArrayLimit.length; j++){
if (ArrayLimit[j][ArrayLimit[0].length-1] == points[i].id){
points[i].selected = true;
points[i].schemaInv = true;
}
}
}
@ -1620,8 +1605,6 @@ function drawBarChart(){ // Draw the horizontal barchart with the correlations.
.tickSize(0)
.outerTickSize(0);
//Add group for the y axis
mainGroup.append("g")
.attr("class", "y axis")
@ -1773,7 +1756,7 @@ function updateBarChart() {
})
.on("mousemove", function(d) {
points.forEach(function (p) {
if (p.selected == true) {
if (p.schemaInv == true) {
p.DimON = d[0];
}
})
@ -1818,7 +1801,7 @@ function brushmove() {
//Update the label size
d3v3.selectAll(".y.axis text")
.style("font-size", textScale(selected.length));
//Update the big bar chart
updateBarChart();
@ -1879,7 +1862,7 @@ function brushmove() {
//Create a gradient
function createGradient(idName, endPerc) {
var colorsBarChart = ['#000000'];
var colorsBarChart = ['#919191'];
colorsBarChart.reverse();
@ -2062,7 +2045,7 @@ var IDS = [];
RadarChart("#starPlot", wrapData, colors, IDS, radarChartOptions);
function BetatSNE(points){ // Run the main visualization
if (points.length) { // If points exist (at least 1 point)
selectedPoints = [];
@ -2486,24 +2469,23 @@ if (points.length) { // If points exist (at least 1 point)
let vertex = new THREE.Vector3((((points[i].x/dimensions)*2) - 1)*dimensions, (((points[i].y/dimensions)*2) - 1)*dimensions*-1, 0);
pointsGeometry.vertices.push(vertex);
geometry.vertices.push(vertex);
if (points[i].selected == false){
var color = new THREE.Color("rgb(211, 211, 211)");
} else if (points[i].DimON != null) {
if (points[i].DimON != null) {
let temp = points[i].DimON.match(/\d+/)[0];
var maxDim = (d3.max(points,function(d){ if(d.schemaInv == true){return d[temp]}; }));
var minDim = (d3.min(points,function(d){ if(d.schemaInv == true){return d[temp]}; }));
var maxDim = (d3.max(points,function(d){ if(d.selected == true){return d[temp]}; }));
var minDim = (d3.min(points,function(d){ if(d.selected == true){return d[temp]}; }));
let colorsBarChart = ['#fcfbfd','#efedf5','#dadaeb','#bcbddc','#9e9ac8','#807dba','#6a51a3','#54278f','#3f007d'];
let colorsBarChart = ['#efedf5','#dadaeb','#bcbddc','#9e9ac8','#807dba','#6a51a3','#54278f','#3f007d'];
var calcStepDim = (maxDim-minDim)/8;
var colorScale = d3.scaleLinear()
.domain(d3.range(minDim, maxDim+calcStepDim, calcStepDim))
.range(colorsBarChart);
var color = new THREE.Color(colorScale(points[i][temp]));
} else if(points[i].starplot == true){
var color = new THREE.Color(colorScl(points[i].id));
} else if (points[i].selected == false && points[i].schemaInv == true){
var color = new THREE.Color("rgb(145, 145, 145)");
} else if (points[i].selected == false){
var color = new THREE.Color("rgb(211, 211, 211)");
} else if (ColSizeSelector == "color") {
var color = new THREE.Color(colorScale(points[i].beta));
}
@ -2546,7 +2528,7 @@ if (points.length) { // If points exist (at least 1 point)
var labels_dim = [];
var abbr_labels_dim = [];
labels_dim = d3.range(minDim, maxDim+calcStepDim, calcStepDim);
console.log(labels_dim);
for (var i=0; i<9; i++){
labels_dim[i] = labels_dim[i].toFixed(2);
abbr_labels_dim[i] = abbreviateNumber(labels_dim[i]);
@ -2571,26 +2553,26 @@ if (points.length) { // If points exist (at least 1 point)
}
}
for (var j=0; j < points.length; j++){
if(temporal == 0 && points[j].DimON == null){
if (ColSizeSelector == "color"){
d3.select("#legend1").selectAll('*').remove();
var svg = d3.select("#legend1");
svg.append("g")
.attr("class", "legendLinear")
.attr("transform", "translate(10,15)");
var legend = d3.legendColor()
.labelFormat(d3.format(",.0f"))
.cells(9)
.labels([abbr_labels_beta[0],abbr_labels_beta[1],abbr_labels_beta[2],abbr_labels_beta[3],abbr_labels_beta[4],abbr_labels_beta[5],abbr_labels_beta[6],abbr_labels_beta[7],abbr_labels_beta[8]])
.title("1 / sigma")
.scale(colorScale);
svg.select(".legendLinear")
.call(legend);
break;
} else {
if(temporal == 0 && points[j].DimON == null){
if (ColSizeSelector == "color"){
d3.select("#legend1").selectAll('*').remove();
var svg = d3.select("#legend1");
svg.append("g")
.attr("class", "legendLinear")
.attr("transform", "translate(10,15)");
var legend = d3.legendColor()
.labelFormat(d3.format(",.0f"))
.cells(9)
.labels([abbr_labels_beta[0],abbr_labels_beta[1],abbr_labels_beta[2],abbr_labels_beta[3],abbr_labels_beta[4],abbr_labels_beta[5],abbr_labels_beta[6],abbr_labels_beta[7],abbr_labels_beta[8]])
.title("1 / sigma")
.scale(colorScale);
svg.select(".legendLinear")
.call(legend);
break;
} else {
d3.select("#legend1").selectAll('*').remove();
var svg = d3.select("#legend1");

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