StackGenVis: Alignment of Data, Algorithms, and Models for Stacking Ensemble Learning Using Performance Metrics
https://doi.org/10.1109/TVCG.2020.3030352
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250 lines
7.3 KiB
250 lines
7.3 KiB
(function (global, factory) {
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typeof exports === 'object' && typeof module !== 'undefined' ? factory(exports, require('vega-dataflow'), require('vega-util'), require('d3-force')) :
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typeof define === 'function' && define.amd ? define(['exports', 'vega-dataflow', 'vega-util', 'd3-force'], factory) :
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(global = global || self, factory((global.vega = global.vega || {}, global.vega.transforms = {}), global.vega, global.vega, global.d3));
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}(this, function (exports, vegaDataflow, vegaUtil, d3Force) { 'use strict';
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var ForceMap = {
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center: d3Force.forceCenter,
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collide: d3Force.forceCollide,
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nbody: d3Force.forceManyBody,
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link: d3Force.forceLink,
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x: d3Force.forceX,
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y: d3Force.forceY
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};
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var Forces = 'forces',
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ForceParams = [
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'alpha', 'alphaMin', 'alphaTarget',
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'velocityDecay', 'forces'
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],
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ForceConfig = ['static', 'iterations'],
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ForceOutput = ['x', 'y', 'vx', 'vy'];
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/**
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* Force simulation layout.
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* @constructor
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* @param {object} params - The parameters for this operator.
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* @param {Array<object>} params.forces - The forces to apply.
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*/
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function Force(params) {
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vegaDataflow.Transform.call(this, null, params);
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}
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Force.Definition = {
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"type": "Force",
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"metadata": {"modifies": true},
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"params": [
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{ "name": "static", "type": "boolean", "default": false },
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{ "name": "restart", "type": "boolean", "default": false },
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{ "name": "iterations", "type": "number", "default": 300 },
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{ "name": "alpha", "type": "number", "default": 1 },
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{ "name": "alphaMin", "type": "number", "default": 0.001 },
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{ "name": "alphaTarget", "type": "number", "default": 0 },
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{ "name": "velocityDecay", "type": "number", "default": 0.4 },
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{ "name": "forces", "type": "param", "array": true,
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"params": [
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{
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"key": {"force": "center"},
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"params": [
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{ "name": "x", "type": "number", "default": 0 },
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{ "name": "y", "type": "number", "default": 0 }
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]
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},
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{
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"key": {"force": "collide"},
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"params": [
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{ "name": "radius", "type": "number", "expr": true },
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{ "name": "strength", "type": "number", "default": 0.7 },
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{ "name": "iterations", "type": "number", "default": 1 }
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]
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},
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{
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"key": {"force": "nbody"},
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"params": [
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{ "name": "strength", "type": "number", "default": -30 },
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{ "name": "theta", "type": "number", "default": 0.9 },
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{ "name": "distanceMin", "type": "number", "default": 1 },
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{ "name": "distanceMax", "type": "number" }
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]
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},
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{
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"key": {"force": "link"},
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"params": [
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{ "name": "links", "type": "data" },
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{ "name": "id", "type": "field" },
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{ "name": "distance", "type": "number", "default": 30, "expr": true },
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{ "name": "strength", "type": "number", "expr": true },
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{ "name": "iterations", "type": "number", "default": 1 }
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]
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},
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{
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"key": {"force": "x"},
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"params": [
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{ "name": "strength", "type": "number", "default": 0.1 },
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{ "name": "x", "type": "field" }
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]
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},
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{
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"key": {"force": "y"},
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"params": [
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{ "name": "strength", "type": "number", "default": 0.1 },
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{ "name": "y", "type": "field" }
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]
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}
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] },
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{
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"name": "as", "type": "string", "array": true, "modify": false,
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"default": ForceOutput
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}
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]
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};
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var prototype = vegaUtil.inherits(Force, vegaDataflow.Transform);
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prototype.transform = function(_, pulse) {
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var sim = this.value,
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change = pulse.changed(pulse.ADD_REM),
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params = _.modified(ForceParams),
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iters = _.iterations || 300;
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// configure simulation
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if (!sim) {
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this.value = sim = simulation(pulse.source, _);
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sim.on('tick', rerun(pulse.dataflow, this));
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if (!_.static) {
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change = true;
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sim.tick(); // ensure we run on init
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}
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pulse.modifies('index');
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} else {
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if (change) {
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pulse.modifies('index');
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sim.nodes(pulse.source);
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}
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if (params || pulse.changed(pulse.MOD)) {
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setup(sim, _, 0, pulse);
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}
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}
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// run simulation
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if (params || change || _.modified(ForceConfig)
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|| (pulse.changed() && _.restart))
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{
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sim.alpha(Math.max(sim.alpha(), _.alpha || 1))
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.alphaDecay(1 - Math.pow(sim.alphaMin(), 1 / iters));
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if (_.static) {
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for (sim.stop(); --iters >= 0;) sim.tick();
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} else {
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if (sim.stopped()) sim.restart();
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if (!change) return pulse.StopPropagation; // defer to sim ticks
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}
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}
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return this.finish(_, pulse);
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};
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prototype.finish = function(_, pulse) {
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var dataflow = pulse.dataflow;
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// inspect dependencies, touch link source data
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for (var args=this._argops, j=0, m=args.length, arg; j<m; ++j) {
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arg = args[j];
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if (arg.name !== Forces || arg.op._argval.force !== 'link') {
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continue;
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}
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for (var ops=arg.op._argops, i=0, n=ops.length, op; i<n; ++i) {
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if (ops[i].name === 'links' && (op = ops[i].op.source)) {
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dataflow.pulse(op, dataflow.changeset().reflow());
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break;
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}
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}
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}
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// reflow all nodes
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return pulse.reflow(_.modified()).modifies(ForceOutput);
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};
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function rerun(df, op) {
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return function() { df.touch(op).run(); }
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}
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function simulation(nodes, _) {
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var sim = d3Force.forceSimulation(nodes),
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stopped = false,
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stop = sim.stop,
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restart = sim.restart;
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sim.stopped = function() {
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return stopped;
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};
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sim.restart = function() {
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stopped = false;
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return restart();
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};
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sim.stop = function() {
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stopped = true;
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return stop();
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};
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return setup(sim, _, true).on('end', function() { stopped = true; });
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}
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function setup(sim, _, init, pulse) {
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var f = vegaUtil.array(_.forces), i, n, p, name;
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for (i=0, n=ForceParams.length; i<n; ++i) {
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p = ForceParams[i];
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if (p !== Forces && _.modified(p)) sim[p](_[p]);
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}
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for (i=0, n=f.length; i<n; ++i) {
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name = Forces + i;
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p = init || _.modified(Forces, i) ? getForce(f[i])
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: pulse && modified(f[i], pulse) ? sim.force(name)
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: null;
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if (p) sim.force(name, p);
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}
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for (n=(sim.numForces || 0); i<n; ++i) {
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sim.force(Forces + i, null); // remove
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}
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sim.numForces = f.length;
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return sim;
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}
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function modified(f, pulse) {
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var k, v;
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for (k in f) {
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if (vegaUtil.isFunction(v = f[k]) && pulse.modified(vegaUtil.accessorFields(v)))
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return 1;
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}
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return 0;
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}
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function getForce(_) {
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var f, p;
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if (!vegaUtil.hasOwnProperty(ForceMap, _.force)) {
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vegaUtil.error('Unrecognized force: ' + _.force);
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}
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f = ForceMap[_.force]();
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for (p in _) {
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if (vegaUtil.isFunction(f[p])) setForceParam(f[p], _[p], _);
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}
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return f;
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}
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function setForceParam(f, v, _) {
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f(vegaUtil.isFunction(v) ? function(d) { return v(d, _); } : v);
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}
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exports.force = Force;
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Object.defineProperty(exports, '__esModule', { value: true });
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}));
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